zScoreThrethold

background

introns


    total coverage of output of <a rd-options="" href="/link/totalCoverage?package=InPAS&version=1.4.4" data-mini-rdoc="InPAS::totalCoverage">totalCoverage</a>


totalCov


    output of <a rd-options="" href="/link/utr3Annotation?package=InPAS&version=1.4.4" data-mini-rdoc="InPAS::utr3Annotation">utr3Annotation</a>


utr3


calculate local background cutoff value based on z-score


 misc 

Alternative polyadenylation (APA) is one of the important
post-transcriptional regulation mechanisms which occurs in
most human genes. InPAS facilitates the discovery of novel
APA sites from RNAseq data. It leverages cleanUpdTSeq to fine
tune identified APA sites.

Jianhong Ou

InPAS

Identification of Novel alternative PolyAdenylation Sites (PAS)

zScoreThrethold function


    total coverage of output of <a rd-options='' href='totalCoverage'>totalCoverage</a>



    output of <a rd-options='' href='utr3Annotation'>utr3Annotation</a>


zScoreThrethold: calculate local background cutoff value

Description

Usage

Arguments

Value