APIS (version 2.0.7)

import_from_ped: Import from Plink .ped

Description

Import from Plink .ped

Usage

import_from_ped(
  ped_file,
  no_fid = FALSE,
  no_parents = FALSE,
  no_sex = FALSE,
  no_pheno = FALSE,
  marker_names = NULL
)

Value

matrix of genotypes for APIS

Arguments

ped_file

name of the ped file (from Plink)

no_fid

if "no_fid" parameter was used in plink (default : FALSE)

no_parents

if "no_parents" parameter was used in plink (default : FALSE)

no_sex

if "no_sex" parameter was used in plink (default : FALSE)

no_pheno

if "no_pheno" parameter was used in plink (default : FALSE)

marker_names

list of marker names (default : NULL)