ASPData


  Simulations of 1000 controls and 1000 affected sib pairs with 22 SNPs. There is one causal SNP with an OR of 2.


datasets

This package allows to make inference on the properties of causal genetic
variants in linkage disequilibrium with genotyped markers. In a first step,
we select a subset of variants using a score statistic for affected
sib-pairs. In a second step, on the selected subset, we make
inference on causal genetic variants in the considered region.

Claire DandineRoulland

ASPBay

Bayesian Inference on Causal Genetic Variants using Affected
Sib-Pairs Data

ASPData function

A list with the following elements.
  <dl>
    <dt><code>Control</code></dt><dd>21 genotypes of controls no including causal SNP</dd> <dt><code>Index</code></dt><dd>21 genotypes of index cases no including causal SNP</dd> <dt><code>IBD</code></dt><dd>Vector of IBD states for each affected sib pairs</dd> <dt><code>Causal</code></dt><dd>The name of the causal SNP</dd> </dl> 

ASPData: Simulated dataset

Description

Usage

Arguments

Format

Details

Examples