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AnnotationFuncs (version 1.18.0)
Annotation translation functions
Description
Functions for handling translating between different identifieres using the Biocore Data Team data-packages (e.g. org.Bt.eg.db).
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1.22.0
1.20.0
1.18.0
1.16.0
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Version
1.18.0
License
GPL-2
Maintainer
Stefan McKinnon Edwards
Last Published
November 29th, 2010
Functions in AnnotationFuncs (1.18.0)
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AnnotationFuncs-package
Annotation translation functions
getEvidenceCodes
Returns GO evidence codes.
getOrthologs
Performs quicker lookup for orthologs in homologe data packages...
pickRefSeq
Picks a prioritised RefSeq identifier from a list of identifiers...
removeNAs
Removes entries equal NA from list or vector...
.dbEscapeString
Private Escape string...
translate
Translate between different identifiers...
.pickRef
Secret function that does the magic for pickRefSeq.
pickGO
Cleans up result from org...
.getTableName
Gets the table name from the INPARANOID style genus names.
mapLists
Replaces contents of list A with elements of list B...