newResources

getImportPreparer

ImportPreparer-class

show,ImportPreparer-method

newResources,ImportPreparer-method

UCSCTrackImportPreparer-class

UCSCTrackImportPreparer

newResources,UCSCTrackImportPreparer-method

newResources,UCSCFullTrackImportPreparer-method

HaemCodeImportPreparer-class

HaemCodeImportPreparer

newResources,HaemCodeImportPreparer-method

EncodeImportPreparer-class

EncodeImportPreparer

newResources,EncodeImportPreparer-method

annotationHubRoot

metadataList

metadataTable

sourceUrls

EnsemblFastaImportPreparer-class

EnsemblFastaImportPreparer

newResources,EnsemblFastaImportPreparer-method

EnsemblGtfImportPreparer-class

EnsemblGtfImportPreparer

newResources,EnsemblGtfImportPreparer-method

RefNetImportPreparer-class

RefNetImportPreparer

newResources,RefNetImportPreparer-method

dbSNPVCFImportPreparer-class

dbSNPVCFImportPreparer

newResources,dbSNPVCFImportPreparer-method

Grasp2ImportPreparer-class

Grasp2ImportPreparer

newResources,Grasp2ImportPreparer-method

Inparanoid8ImportPreparer-class

Inparanoid8ImportPreparer

newResources,Inparanoid8ImportPreparer-method

NCBIImportPreparer-class

NCBIImportPreparer

newResources,NCBIImportPreparer-method

UCSCChainPreparer-class

UCSCChainPreparer

newResources,UCSCChainPreparer-method

The <code>ImportPreparer</code> and derived classes are used for dispatch
 during data discovery (see <code><a rd-options="" href="/link/newResources?package=AnnotationHubData&version=1.2.2" data-mini-rdoc="AnnotationHubData::newResources">newResources</a></code>). There is one
 <code>ImportPreparer</code> class for each data source for
 <code><a rd-options="" href="/link/AnnotationHubMetadata?package=AnnotationHubData&version=1.2.2" data-mini-rdoc="AnnotationHubData::AnnotationHubMetadata">AnnotationHubMetadata</a></code>. <code>newResources</code> is a generic function; with methods implemented
 for each <code>ImportPreparer</code>.

classes

These recipes convert a wide variety and a growing number of
public bioinformatic data sets into easily-used standard Bioconductor data
structures.

Bioconductor Package Maintainer

AnnotationHubData

Transform public data resources into Bioconductor Data Structures

ImportPreparer-class function

The <code>ImportPreparer</code> and derived classes are used for dispatch
 during data discovery (see <code><a href="newResources" rd-options="">newResources</a></code>). There is one
 <code>ImportPreparer</code> class for each data source for
 <code><a href="AnnotationHubMetadata" rd-options="">AnnotationHubMetadata</a></code>.

 <code>newResources</code> is a generic function; with methods implemented
 for each <code>ImportPreparer</code>.

Class <code>ImportPreparer</code> and generic <code>newResources</code>

ImportPreparer-class: Class `ImportPreparer` and generic `newResources`

Description

Arguments

See Also

Examples