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AnnotationHubData (version 1.2.2)
Transform public data resources into Bioconductor Data Structures
Description
These recipes convert a wide variety and a growing number of public bioinformatic data sets into easily-used standard Bioconductor data structures.
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Version
Version
1.2.2
1.0.0
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Version
1.2.2
License
Artistic-2.0
Maintainer
Bioconductor Package Maintainer
Last Published
January 1st, 1970
Functions in AnnotationHubData (1.2.2)
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AnnotationHubRecipes-package
Transform public data resources into Bioconductor Data Structures ~~ package title ~~
flog
flog
makeEnsemblFasta
Functions to convert Ensembl FASTA files to FaFile and TwoBitFile for inclusion in AnnotationHub.
ImportPreparer-class
Class
ImportPreparer
and generic
newResources
updateResources
updateResources
AnnotationHubMetadata-class
Class
"AnnotationHubMetadata"
and methods
makeGencodeFasta
Recipe to add Gencode FASTA resources to AnnotationHub
upload_to_S3
Upload a file to Amazon S3