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BENMMI (version 4.3-7)

Benthic Multi-Metric Index

Description

Analysis tool for evaluating benthic multimetric indices (BENMMIs). It generates reproducible reports on the analysis of benthic data, e.g., validation and correction of species names, sample pooling, automatic conversion of genus to species names, outlier detection, benthic indicator calculation, optimization of single and multimetric indicators against a pressure gradient, and spatial aggregation of benthic indicators. One of its use cases was the development of a common benthic indicator for (publication accepted by Ecological Indicators). See Van Loon et al. (2018) for details.

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Version

Install

install.packages('BENMMI')

Monthly Downloads

64

Version

4.3-7

License

GPL (>= 3)

Maintainer

Dennis Walvoort

Last Published

October 12th, 2020

Functions in BENMMI (4.3-7)

ci_mean

Mean and Confidence Interval
read_settings

Read BENMMI Settings File
BENMMIdir

Create BENMMI Directory Structure
toString_weights

Construct a Text Representation of a Weight Vector
read_mmi

Read and Validate BENMMI Input Files
benmmi

Perform BENMMI Analysis
benmmi-pkg

Benthic Multi-Metric Indicator Analysis