A_old

<p>A matrix of TF-gene regulation strength with genes as rows and TFs as columns, sampled from the previous round. During the Gibbs sampling process, this matrix is used as prior for a new round of regulation strength sampling.</p>

Regulation_Strength

Prior transcription factor binding knowledge and target gene expression data are integrated in a Bayesian framework for functional cis-regulatory module inference. Using Gibbs sampling, we iteratively estimate transcription factor associations for each gene, regulation strength for each binding event and the hidden activity for each transcription factor.

Xi Chen

BICORN

Integrative Inference of De Novo Cis-Regulatory Modules

Jianhua Xuan

A_old function

Format

TF-gene regulation strength matrix sampled from the previous round — A_old

TF-gene regulation strength matrix sampled from the previous round

A_old: TF-gene regulation strength matrix sampled from the previous round

Description

Usage

Arguments

Format