C_old

<p>A matrix of TF-gene binding network sampled from the previous round, with each unit either 1 (binding) or 0 (non-binding). During the Gibbs sampling process, this is used as a prior for a new round of binding network sampling.</p>

Binding

Prior transcription factor binding knowledge and target gene expression data are integrated in a Bayesian framework for functional cis-regulatory module inference. Using Gibbs sampling, we iteratively estimate transcription factor associations for each gene, regulation strength for each binding event and the hidden activity for each transcription factor.

Xi Chen

BICORN

Integrative Inference of De Novo Cis-Regulatory Modules

Jianhua Xuan

C_old function

Format

TF-gene binding network sampled from the previous round — C_old

TF-gene binding network sampled from the previous round

C_old: TF-gene binding network sampled from the previous round

Description

Usage

Arguments

Format