Exp_data

<p>A matrix of normalized gene expression data with genes as rows and samples as columns. The gene expression data can be either time-course data measured under multiple time points or steady state data generated from at least two different conditions.</p>

Gene_expression

Prior transcription factor binding knowledge and target gene expression data are integrated in a Bayesian framework for functional cis-regulatory module inference. Using Gibbs sampling, we iteratively estimate transcription factor associations for each gene, regulation strength for each binding event and the hidden activity for each transcription factor.

Xi Chen

BICORN

Integrative Inference of De Novo Cis-Regulatory Modules

Jianhua Xuan

Exp_data function

Format

Gene expression data — Exp_data

Gene expression data

Exp_data: Gene expression data

Description

Usage

Arguments

Format