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BIGDAWG (version 1.3.4)

Case-Control Analysis of Multi-Allelic Loci

Description

Data sets and functions for chi-squared Hardy-Weinberg and case-control association tests of highly polymorphic genetic data [e.g., human leukocyte antigen (HLA) data]. Performs association tests at multiple levels of polymorphism (haplotype, locus and HLA amino-acids) as described in Pappas DJ, Marin W, Hollenbach JA, Mack SJ (2016) . Combines rare variants to a common class to account for sparse cells in tables as described by Hollenbach JA, Mack SJ, Thomson G, Gourraud PA (2012) .

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Install

install.packages('BIGDAWG')

Monthly Downloads

434

Version

1.3.4

License

GPL (>= 3)

Maintainer

Last Published

April 9th, 2016

Functions in BIGDAWG (1.3.4)