raw.output


	This data set is an example of the output obtained from the bayespeak() function, in particular as an example of job parameters. The ChIP-seq experiment in question investigates ER binding in cells from the MCF7 cell line.<p></p><p>	To keep the size of BayesPeak down, raw.output$peaks has been truncated - only the peaks on chromosome 16 are given. raw.output$QC has not been truncated in any way.
</p>

datasets

This package is an implementation of the BayesPeak
algorithm for peak-calling in ChIP-seq data.

Jonathan Cairns

BayesPeak

Bayesian Analysis of ChIP-seq Data

raw.output function

A list of 3 objects. See <code><a rd-options="" href="/link/bayespeak?package=BayesPeak&version=1.24.0" data-mini-rdoc="BayesPeak::bayespeak">bayespeak</a></code> for more details.

Format

This data set is an example of the output obtained from the bayespeak() function, in particular as an example of job parameters. The ChIP-seq experiment in question investigates ER binding in cells from the MCF7 cell line.

	To keep the size of BayesPeak down, raw.output$peaks has been truncated - only the peaks on chromosome 16 are given. raw.output$QC has not been truncated in any way.

raw.output: Example raw.output object

Description

Usage

Arguments

Format

References