saveOutput

A list returned by the peakDetection function.

peakdet

A character string defining the output file.

filename

This function saves the output of the peakDetetection funtion (peakgenes, peaklocation and peakheight)
to a text file.

Enables the user to systematically identify and visualize impulse-like gene expression changes within short genomic series experiments. In order to detect such activation peaks, the gene expression is treated as a signal that propagates along an experimental axis (time, temperature or other series conditions). Peaks are selected by exhaustive identification of local maximums and subsequent filtering based on a range of controllable parameters. Moreover, the 'Biopeak' package provides a series of data exploration tools including: expression profile plots, correlation heat maps and clustering functionalities.

saveOutput: Save the peak detection output to a text file

Description

Usage

Arguments

Value