CINNA v1.0.0

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by Minoo Ashtiani

Deciphering Central Informative Nodes in Network Analysis

Functions for computing, comparing and demonstrating top informative centrality measures within a network.

Functions in CINNA

Name Description
calculate.centralities Centrality measure calculation
cortex Macaque Visual Cortex Network
drugtarget Drug Target Network
giant.component.extract Giant component extraction of a graph
graph.extract.components Component extraction of a graph
kangaroo Kangaroo Network
misc.extract.components Component extraction of miscellaneous graph formats
pca.centralities Ranking centrality measure based on contributions
print.visualize.association Print pairwise association between centrality measure's plot into a file
print.visualize.correlations Print centrality correlation plot
print.visualize.dendogram Print dendrogram plot of a graph
print.visualize.graph Print visualized based on centrality values graph
tsne.centralities t-Distributed Stochastic Neighbor Embedding (t-SNE) on centrality measures
proper.centralities Proper centrality measure representation
rhesus Moreno Rhesus Network
visualize.correlations Correlation plot between centrality values
visualize.dendogram Dendrogram visualization based on a specific centrality measure
visualize.association Pairwise association between centrality values
summary.pca.centralities Summarize PCA result related to centrality measures
summary.tsne.centralities Summarize t-Distributed Stochastic Neighbor Embedding (t-SNE) on centrality measures
visualize.graph Graph visualization based on a specific centrality measure
visualize.heatmap Heatmap between centrality values
print.visualize.heatmap Print centralities' heatmap
print.visualize.pair.correlation Print pairwise correlation of centrality measure and histogram plot
summary.calculate.centralities Summarize centrality measure calculation results
summary.graph.extract.components Summarize component extraction of a graph
visualize.pair.correlation Pairwise correlation between two centrality values
zachary Zachary Karate Club Network
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Details

Type Package
Date 2017-07-04
License GPL-3
Encoding UTF-8
LazyData true
RoxygenNote 6.0.1
VignetteBuilder knitr
NeedsCompilation no
Packaged 2017-07-15 14:49:16 UTC; MINoOo
Repository CRAN
Date/Publication 2017-07-15 21:00:03 UTC

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