CINNA v1.1.2

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Deciphering Central Informative Nodes in Network Analysis

Functions for computing, comparing and demonstrating top informative centrality measures within a network.

Functions in CINNA

Name Description
drugtarget Drug Target Network
giant_component_extract Giant component extraction of a graph
print.calculate.centralities Print computed centrality measures results into a file
print.visualize.association Print pairwise association plot among centrality measures into a file
calculate_centralities Centrality measure calculation
cortex Macaque Visual Cortex Network
graph_extract_components Component extraction of a graph
kangaroo Kangaroo Network
misc_extract_components Component extraction of miscellaneous graph formats
pca_centralities Ranking centrality measure based on contributions
print.visualize.pair.correlation Print pairwise correlation and histogram plots between two centrality measures
proper_centralities Proper centrality measure representation
zachary Zachary Karate Club Network
print.visualize.correlations Print centrality correlation plot
print.visualize.dendrogram Print dendrogram plot of a graph
visualize_heatmap Heatmap plot between centrality measures
print.visualize.graph Print visualized based on centrality values graph
print.visualize.heatmap Print the heatmap plot of centrality measures
visualize_dendrogram Dendrogram plot among centrality measures
visualize_graph Graph visualization based on a specific centrality measure
rhesus Moreno Rhesus Network
summary.calculate.centralities Summarize centrality measure calculation results
summary.tsne.centralities Summarize t-Distributed Stochastic Neighbor Embedding (t-SNE) on centrality measures
visualize_pair_correlation Pairwise correlation plot between two centrality measures
summary.graph.extract.components Summarize component extraction of a graph
summary.pca.centralities Summarize PCA result related to centrality measures
visualize_association Pairwise association plot between centrality measures
visualize_correlations Correlation plot between centrality measures
tsne_centralities t-Distributed Stochastic Neighbor Embedding (t-SNE) on centrality measures
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Vignettes of CINNA

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CINNA.Rmd
bibliography.bib
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Details

Type Package
Date 2017-10-23
License GPL-3
Encoding UTF-8
LazyData true
RoxygenNote 6.0.1
VignetteBuilder knitr
NeedsCompilation no
Packaged 2017-10-23 20:50:56 UTC; MinoOo
Repository CRAN
Date/Publication 2017-10-23 21:11:59 UTC

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