CausalR (version 1.4.3)

CreateCG: create a Computational Graph (CG)

Description

Creates a CG network from a .sif file. Takes in a .sif file output from Cytoscape, and creates an 'igraph' representing the network. The edges will be annotated with the type of interaction and a weight (1 for activation and -1 for inhibition)

Usage

CreateCG(sifFile)

Arguments

sifFile

the path of the .sif file that contains all the information about the network Load in .sif file

Value

a CG network

Examples

# get path to example .sif file
network <- system.file(package='CausalR', 'extdata', 'testNetwork.sif')
#create cg
cg = CreateCG(network)