TSS.zebrafish.Zv9:
TSS annotation for Danio rerio (Zv9) obtained from biomaRt
Description
TSS annotation for Danio rerio (Zv9) obtained from biomaRt
Usage
data(TSS.zebrafish.Zv9)
Arguments
Format
GRanges with slot start holding the start position of the gene, slot end
holding the end position of the gene, slot names holding ensembl gene id,
slot seqnames holding the chromosome location where the gene is located and
slot strand holding the strinad information. In addition, the following
variables are included.
description
description of the gene
Details
Annotation data obtained by:
mart <- useMart(biomart="ENSEMBL_MART_ENSEMBL",
host="mar2015.archive.ensembl.org",
path="/biomart/martservice",
dataset="drerio_gene_ensembl")
getAnnotation(mart, featureType = "TSS")