getLocationsAndScales

getLocationsAndScales,matrix-method

getLocationsAndScales,ExpressionSet-method

Either a <code><a rd-options="" href="/link/matrix?package=ClassifyR&version=1.6.2" data-mini-rdoc="ClassifyR::matrix">matrix</a></code> or <code><a rd-options="" href="/link/ExpressionSet?package=ClassifyR&version=1.6.2" data-mini-rdoc="ClassifyR::ExpressionSet">ExpressionSet</a></code> containing
                    data. For a matrix, the rows are features, and the columns
                    are samples.

expression

Unused variables from the <code><a rd-options="" href="/link/matrix?package=ClassifyR&version=1.6.2" data-mini-rdoc="ClassifyR::matrix">matrix</a></code> method passed to the
             <code><a rd-options="" href="/link/ExpressionSet?package=ClassifyR&version=1.6.2" data-mini-rdoc="ClassifyR::ExpressionSet">ExpressionSet</a></code> method.

location

scale

Calculates the location and scale for each feature.


The software formalises a framework for classification in R.
There are four stages; Data transformation, feature selection, classifier training,
and prediction. The requirements of variable types and names are
fixed, but specialised variables for functions can also be provided.
The classification framework is wrapped in a driver loop, that
reproducibly carries out a number of cross-validation schemes.
Functions for differential expression, differential variability,
and differential distribution are included. Additional functions
may be developed by the user, by creating an interface to the framework.

Dario Strbenac

ClassifyR

A framework for two-class classification problems, with
applications to differential variability and differential
distribution testing

getLocationsAndScales function

Either a <code><a href="matrix" rd-options="">matrix</a></code> or <code><a href="ExpressionSet" rd-options="">ExpressionSet</a></code> containing
                    data. For a matrix, the rows are features, and the columns
                    are samples.

Unused variables from the <code><a href="matrix" rd-options="">matrix</a></code> method passed to the
             <code><a href="ExpressionSet" rd-options="">ExpressionSet</a></code> method.

Calculates the location and scale for each feature.

getLocationsAndScales: Calculate Location and Scale

Description

Usage

Arguments

Value

Details

References

Examples