DAISIE (version 1.0.2)

DAISIE_plot_sims: Plot island species-through-time (STT) plots

Description

Produces STT plots. If only one type of species is present in the simulated islands, STT is plotted for all species. If two types are present, three plots are produced: STT for all, STT for type 1 and STT for type 2.

Usage

DAISIE_plot_sims(
island_replicates
)

Arguments

island_replicates

Island replicates in DAISIE format (Produced in DAISIE_sim with format=TRUE option, or in DAISIE_format_sim)

Value

R plot.

Details

R plots with number of total, endemic and non-endemic STTs for different types of species for the entire time span the islands were simulated. 2.5-97.5th percentiles are plotted in light grey, 25-75th percentiles plotted in dark grey.

References

Valente, L.M., A.B. Phillimore and R.S. Etienne (2015). Equilibrium and non-equilibrium dynamics simultaneously operate in the Galapagos islands. Ecology Letters 18: 844-852.

See Also

DAISIE_sim DAISIE_format_sim

Examples

### Plot islands with single process (only one type of species)
data(islands_1type_1000reps)
DAISIE_plot_sims(island_replicates = islands_1type_1000reps)


### Plot island with type 1 and type 2
data(islands_2types_1000reps)
DAISIE_plot_sims(island_replicates = islands_2types_1000reps)