DBGSA (version 1.1)

valuep: function which computes p values from different phenotypes by distance matrix

Description

this function is used to compute the p values from two matrixes which has been calculated before

Usage

valuep(MM,N,pname)

Arguments

MM

a matrix of gene phenotype distances which is generated before by the specific formula

N

a matrix of gene phenotype distances which is generated before randomly by gene resampling

pname

character string which represents the name of the output file

Value

• A named matrix of p values and fdr p values.

Examples

library(fdrtool)
data(distance)
data(rand)
##compute the required p values
valuep(distance,rand,"valuep.txt")