DChIPRep (version 1.2.3)

FDRresults: Accessor and setter for the 'FDRresults' slot of a DChIPRepResults object.

Description

The slot contains the results of the FDR estimation as performed within the function runTesting. It is the complete output of the fdrtool function.

Usage

"FDRresults"(object)
"FDRresults"(object) <- value

Arguments

object

a DChIPRepResults object

value

A DESeqDataSet object

Value

a list containing the estimated false discovery rates

Examples

data(testData)
dcr <- DChIPRepResults(testData)
dcr <- runTesting(dcr)
str(FDRresults(dcr))