DEGreport (version 1.8.2)

degVB: Distribution of the standard desviation of DE genes compared to the background

Description

Distribution of the standard desviation of DE genes compared to the background

Usage

degVB(tags,g1,g2,counts,pop=400)

Arguments

tags

list of genes that are DE

g1

list of samples in group 1

g2

list of samples in group 2

counts

matrix with counts for each samples and each gene. Should be same length than pvalues vector.

pop

number of random samples taken for background comparison

Value

ggplot2 object

Examples

data(DEGreportSet)
detag <- row.names(DEGreportSet$deg[1:10,])
degVB(detag,DEGreportSet$g1,DEGreportSet$g2,DEGreportSet$counts)