Learn R Programming

DEMEtics (version 0.8-7)

Evaluating the genetic differentiation between populations based on Gst and D values.

Description

This package allows to calculate the fixation index Gst (Nei, 1973) and the differentiation index D (Jost, 2008) pairwise between or averaged over several populations. P-values, stating the significance of differentiation, and 95 percent confidence intervals can be estimated using bootstrap resamplings. In the case that more than two populations are compared pairwise, the p-values are adjusted by bonferroni correction and in several other ways due to the multiple comparison from one data set.

Copy Link

Version

Install

install.packages('DEMEtics')

Monthly Downloads

32

Version

0.8-7

License

GPL (>= 2)

Maintainer

Alexander Jueterbock

Last Published

December 3rd, 2013

Functions in DEMEtics (0.8-7)

D.Jost-and-Gst.Nei

Comparing Populations - Differentiation and Fixation Indices
Example.transformed

Allelic Data of Three Populations for Three Loci
Example.untransformed

Allelic Data of Three Populations for Three Loci
DEMEtics-package

Evaluating the genetic differentiation between populations based on Gst and D values.