Parents

<p><code>Parents</code> is a data.frame with four rows. The first row corresponds to the
parental  inbred line common to all bi-parental populations of the American maize NAM experiment
(i.e., B73), whereas the three other rows correspond to alternative inbred parental lines used to
generate other bi-parental populations. For each parental inbred line, the phenotypic values
for five traits are provided, along with two extra columns:
Genotype (providing the line ID) and Weight (providing the weight associated
with the individual, see function EpiTest.fit for details).</p>

datasets

Provides functions to test for gene x gene interactions in a
bi-parental population of inbred lines. The data are fitted with the
mixed linear model described in Rio et al. (2022) <doi:10.1101/2022.12.18.520958>,
that accounts for gene x gene interactions
at both the fixed effect and variance levels. The package also
provides graphical tools to display the gene x gene interaction trend at
the mean level and the variance component analysis.

Simon Rio

EpiTest

Test for Gene x Gene Interactions in Bi-Parental Populations

Tristan Mary-Huard

Parents function

Format

Phenotypes for parental lines of the American maize NAM dataset — Parents

Phenotypes for parental lines of the American maize NAM dataset

Parents: Phenotypes for parental lines of the American maize NAM dataset

Description

Usage

Arguments

Format