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GANPA (version 1.2)
Gene Association Network-Based Pathway Analysis (GANPA)
Description
A network-based gene weighting algorithm for pathway enrichment analysis, using either RNA-seq or microarray data. Zhaoyuan Fang, Weidong Tian and Hongbin Ji (2012)
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Version
Version
1.2
1.1
1.0
Install
install.packages('GANPA')
Monthly Downloads
260
Version
1.2
License
GPL-2
Maintainer
Zhaoyuan Fang
Last Published
March 11th, 2024
Functions in GANPA (1.2)
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weight.gsets.test
Weight genes in pathways with a gene association network
GANPA-package
Gene Association Network-based Pathway Analysis
GSE.Test.Main
Gene-weighted pathway significance analysis
weight.gsets.with.msprot
Weight genes in pathways with a gene association network after correction for multi-subunit proteins