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GANPA (version 1.2)

Gene Association Network-Based Pathway Analysis (GANPA)

Description

A network-based gene weighting algorithm for pathway enrichment analysis, using either RNA-seq or microarray data. Zhaoyuan Fang, Weidong Tian and Hongbin Ji (2012) .

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Version

Install

install.packages('GANPA')

Monthly Downloads

260

Version

1.2

License

GPL-2

Maintainer

Zhaoyuan Fang

Last Published

March 11th, 2024

Functions in GANPA (1.2)

weight.gsets.test

Weight genes in pathways with a gene association network
GANPA-package

Gene Association Network-based Pathway Analysis
GSE.Test.Main

Gene-weighted pathway significance analysis
weight.gsets.with.msprot

Weight genes in pathways with a gene association network after correction for multi-subunit proteins