enrichmentFunction


      <code>annRef</code> is the annotated reference genes and their annotated terms.
  

annRef


       <code>annInterest</code> is the annotated interesting genes and their annotated terms.
  

annInterest


       <code>method</code> is the fdr method. GO-function provides three p value correction methods: "bonferroni", "BH" 
       and "BY". The default is "BY".
  

method


       <code>fdrth</code> is the fdr cutoff to identify statistically significant GO terms. The default is 0.05.
  

fdrth


    Using the hypergenomic distribution test and FDR correction procedure, this function can identify a set of
    statistically significant GO terms.


 methods 

The GO-function package provides a tool to address the redundancy that result from the
GO structure or multiple annotation genes and derive biologically relevant functions from
the statistically significant functions based on some intuitive assumption and statistical
testing.

Jing Wang

GOFunction

GO-function: deriving biologcially relevant functions from statistically significant functions

enrichmentFunction function

<code>annRef</code> is the annotated reference genes and their annotated terms.

<code>annInterest</code> is the annotated interesting genes and their annotated terms.

<code>method</code> is the fdr method. GO-function provides three p value correction methods: "bonferroni", "BH" 
       and "BY". The default is "BY".

<code>fdrth</code> is the fdr cutoff to identify statistically significant GO terms. The default is 0.05.

Using the hypergenomic distribution test and FDR correction procedure, this function can identify a set of
    statistically significant GO terms.

enrichmentFunction: Identification of statistically significant GO terms

Description

Arguments

Value

See Also