getDb

organism


mapping organism name to annotationDb package name


Implemented five methods proposed by Resnik, Schlicker,
Jiang, Lin and Wang respectively for estimating GO semantic
similarities. Support many species, including Anopheles,
Arabidopsis, Bovine, Canine, Chicken, Chimp, Coelicolor, E coli
strain K12 and Sakai, Fly, Gondii, Human, Malaria, Mouse, Pig, Rhesus,
Rat, Worm, Xenopus, Yeast, and Zebrafish.

Guangchuang Yu

GOSemSim

GO-terms Semantic Similarity Measures

getDb function

mapping organism name to annotationDb package name

getDb: getDb

Description

Usage

Arguments

Value