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GOSemSim (version 1.30.2)

infoContentMethod: information content based methods

Description

Information Content Based Methods for semantic similarity measuring

Usage

infoContentMethod(ID1, ID2, ont = "DO", method, organism = "human")

Arguments

ID1
Ontology Term
ID2
Ontology Term
ont
Ontology
method
one of "Resnik", "Jiang", "Lin" and "Rel".
organism
one of supported species

Value

semantic similarity score

Details

implemented for methods proposed by Resnik, Jiang, Lin and Schlicker.