Defunct Functions in GOstats Package
Class "GOHyperGResult"
Tools for manipulating GO and microarrays.
Hypergeometric Tests for GO term association
Extraction and Plotting of GO Terms from a GOHyperGResult Object
Triad Functions
A function to compute a correlation based graph from Gene
Expression Data
A function to compute the distance between pairs of nodes in a graph.
Functions to compute similarities between GO graphs and also
between Entrez Gene IDs based on their induced GO graphs.
Shortest Path Analysis
Construct a GO Graph
Index to Dimnames
Distance matrices for the BCR/ABL and NEG subgroups.
Find genes that are not connected to the others.
Construct the GO graph given a set of leaves.
Summarize Probe Sets Associated with a hyperGTest Result