GOstats-defunct: Defunct Functions in GOstats Package
Description
The functions or variables listed here are no longer part of GOstats as
they are not needed (any more).
Usage
combGOGraph()
hyperGtable()
hyperG2Affy()
selectedGenes()
GOHyperG()
GOKEGGHyperG()
getGoGraph()
Details
combGOGraph
was replaced by join
.
hyperGtable
was replaced by summary
.
hyperG2Affy
was replaced by probeSetSummary
.
GOLeaves
was replaced by graph::leaves
.
selectedGenes
was replaced by geneIdsByCategory
.
GOHyperG
was replaced by hyperGTest
.
GOKEGGHyperG
was replaced by hyperGTest
.
getGoGraph
was replaced by GOGraph
.