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GSEABase (version 1.28.0)
Gene set enrichment data structures and methods
Description
This package provides classes and methods to support Gene Set Enrichment Analysis (GSEA).
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Version
1.34.0
1.32.0
1.30.2
1.28.0
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Version
1.28.0
License
Artistic-2.0
Maintainer
Bioconductor Package Maintainer
Last Published
January 1st, 1970
Functions in GSEABase (1.28.0)
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GeneColorSet-class
Class "GeneColorSet"
CollectionType-class
Class "CollectionType"
CollectionType
Collection Type Class Constructors
GeneSetCollection-methods
Methods to construct GeneSetCollection instances
import/export
Read and write gene sets from Broad or GMT formats
details-methods
Methods for Displaying Detailed GeneSet Information
GeneSet
Methods to construct GeneSet instances
GeneSetCollection-class
Class "GeneSetCollection"
goSlim-methods
Methods for Function goSlim in Package `GSEABase'
getOBOCollection
Read OBO-specified Gene Ontology Collections
mapIdentifiers-methods
Methods for Function mapIdentifiers in Package `GSEABase'
OBOCollection-class
Class "OBOCollection"
GeneIdentifierType
Gene Identifier Class Constructors
GeneSet-class
Class "GeneSet"
incidence-methods
Methods for Constructing Incidence Matricies Between GeneSets
GSEABase-package
Gene set enrichment data structures and methods
GeneColorSet
Methods to Construct "GeneColorSet" Instances
GeneIdentifierType-class
Class "GeneIdentifierType"