Disease Ontology Annotation Vector
geneAnswersConceptRelation
Display a network related to given concepts for a GeneAnswers instance
Concept-Gene Networking Plotting
Sort enrichmentInfo of a GeneAnswers instance
Human gene interaction matrix
Generate Concept-gene network
Example human expression data
Present top CABIO.PATH enrichment test information with genes
build and display a network for given IDs and interaction Matrix
map Entrez gene IDs to caBIO gene IDs
Make a concept-gene cross tabulation
Concept-Gene Networking Plotting
Present top REACTOME.PATH enrichment test information
Present top REACTOME.PATH enrichment test information with genes
map caBIO gene IDs to Entrez gene IDs
Plot Category Links
Concept-Gene Networking Plotting
Generate Concept-Gene Tabulates
Retrieve categories containing given genes
Generate top concepts-genes table
build and display a network for given IDs
Get GO list of given genes
Get DOLite Terms of Given DOLite IDs
Generate a multigroup Concepts-genes analysis report
Obtain the total number of genes in the given annotation library
Mapping Category IDs to Terms
Retrieve KEGG categories containing given genes
Get Pathway names of given KEGG IDs
retrieve direct interacted nodes for given IDs and interaction Matrix
Present top DOLITE enrichment test information with genes
Convert entrez gene IDs to gene symbols
Present top DOLITE enrichment test information
Search specified information from Entrez site
Present top KEGG enrichment test information
Present top CABIO.PATH enrichment test information
Present top KEGG enrichment test information with genes
Build an object of a GeneAnswers class
Retrieve caBIO path categories containing given genes
Make pie chart and bar plot
Retrieve REACTOME path categories containing given genes
Get Pathway names of given REACTOME PATH_DB IDs
Get Pathway names of given REACTOME PATH_DB IDs
Present top GO enrichment test information with genes
Present top GO enrichment test information
Several data objects related with DO (Disease Ontology) and its mapping to genes
Disease Ontology Annotation List
Class GeneAnswers: contain and describe the relationship between given gene data and specified category
Integrated Interpretation of Genes
Mapping homogenes for a GeneAnswers instance
getListGIF
Get homologous genes of given genes
Example mouse expression data
Present top enrichment test information
Example mouse gene data
Make GeneAnswers Instance readable
Present top enrichment test information with genes
Pie Chart and Bar Plots
Fly gene interaction matrix
retrieve multilayer interacted nodes for given IDs and interaction Matrix
retrieve parents or children GO IDs for given GO IDs
Mouse gene interaction matrix
Example human gene data
Rat gene interaction matrix
Example human expression data