Pie Chart and Bar Plots
Fly gene interaction matrix
Generate Concept-Gene Tabulates
Retrieve caBIO path categories containing given genes
Concept-Gene Networking Plotting
Get Pathway names of given REACTOME PATH_DB IDs
Get homologous genes of given genes
getListGIF
Present top enrichment test information with genes
Generate a multigroup Concepts-genes analysis report
Obtain the total number of genes in the given annotation library
Present top enrichment test information
Disease Ontology Annotation Vector
Class GeneAnswers: contain and describe the relationship between given gene data and specified category
Concept-Gene Networking Plotting
Integrated Interpretation of Genes
Retrieve categories containing given genes
Mapping Category IDs to Terms
Retrieve KEGG categories containing given genes
Get Pathway names of given KEGG IDs
Example mouse expression data
Example mouse gene data
Build an object of a GeneAnswers class
Mapping homogenes for a GeneAnswers instance
Make pie chart and bar plot
Make GeneAnswers Instance readable
retrieve multilayer interacted nodes for given IDs and interaction Matrix
retrieve parents or children GO IDs for given GO IDs
Rat gene interaction matrix
Example human expression data
Present top CABIO.PATH enrichment test information with genes
build and display a network for given IDs and interaction Matrix
map Entrez gene IDs to caBIO gene IDs
build and display a network for given IDs
Make a concept-gene cross tabulation
Retrieve REACTOME path categories containing given genes
Generate top concepts-genes table
Get Pathway names of given REACTOME PATH_DB IDs
retrieve direct interacted nodes for given IDs and interaction Matrix
Convert entrez gene IDs to gene symbols
Several data objects related with DO (Disease Ontology) and its mapping to genes
Human gene interaction matrix
Disease Ontology Annotation List
Present top GO enrichment test information
Example human expression data
Present top GO enrichment test information with genes
Present top KEGG enrichment test information
Present top KEGG enrichment test information with genes
Present top DOLITE enrichment test information
Present top DOLITE enrichment test information with genes
Present top REACTOME.PATH enrichment test information
Present top REACTOME.PATH enrichment test information with genes
map caBIO gene IDs to Entrez gene IDs
geneAnswersConceptRelation
Display a network related to given concepts for a GeneAnswers instance
Concept-Gene Networking Plotting
Plot Category Links
Generate Concept-gene network
Sort enrichmentInfo of a GeneAnswers instance
Get GO list of given genes
Example human gene data
Get DOLite Terms of Given DOLite IDs
Search specified information from Entrez site
Mouse gene interaction matrix
Present top CABIO.PATH enrichment test information