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GeneAnswers (version 2.14.0)

getREACTOMEPATHTerms: Get Pathway names of given REACTOME PATH_DB IDs

Description

Function to map given REACTOME PATH_DB IDs to Pathway names.

Usage

getREACTOMEPATHTerms(pathIDs, allowNA=TRUE)

Arguments

pathIDs
a REACTOME PATHWAY IDs vector
allowNA
logic, to determine whether change unrecognized term names or not

Value

return a REACTOME pathway terms of given REACTOME PATH_DB IDs. If the REACTOME service is not available, the function will stop.

References

Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10

Examples

Run this code
## Not run: getREACTOMEPATHTerms(c('174143', '453274'))

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