Learn R Programming

GenoTriplo (version 1.1.3)

Genotyping Triploids (or Diploids) from Luminescence Data

Description

Genotyping of triploid individuals from luminescence data (marker probeset A and B). Works also for diploids. Two main functions: Run_Clustering() that regroups individuals with a same genotype based on proximity and Run_Genotyping() that assigns a genotype to each cluster. For Shiny interface use: launch_GenoShiny().

Copy Link

Version

Install

install.packages('GenoTriplo')

Monthly Downloads

293

Version

1.1.3

License

GPL

Maintainer

Julien Roche

Last Published

March 25th, 2025

Functions in GenoTriplo (1.1.3)

GenoTriplo_to_geno

Example of dataset for genotyping
launch_GenoShiny

Shiny App for genotyping
Run_Clustering

Launch parallel clustering
Clustering

Clustering function
Create_Dataset

Create dataset in appropriate format
Run_Genotyping

Launch genotyping phase in parallel
GenoTriplo_to_clust

Example of dataset for clustering