
When a GMT file is loaded e.g. by <code>data("GeneOntology_BP.gmt")</code> the gmt file is stored in the variable <code>gmt</code>


datasets

Given expression data this package calculate a multivariate
geometrical characterization of the differential expression and can also
perform gene-set enrichment.

Neil Clark

GeoDE

A geometrical Approach to Differential expression and gene-set
enrichment

gmt function

The format is alist of character variables defining gene sets and their labels (first element).

gmt: The currently loaded gmtfile

Description

Usage

Arguments

Format

Examples