Learn R Programming

⚠️There's a newer version (2.18.0) of this package.Take me there.

Heatplus (version 2.12.0)

Heatmaps with row and/or column covariates and colored clusters

Description

Display a rectangular heatmap (intensity plot) of a data matrix. By default, both samples (columns) and features (row) of the matrix are sorted according to a hierarchical clustering, and the corresponding dendrogram is plotted. Optionally, panels with additional information about samples and features can be added to the plot.

Copy Link

Version

Version

2.12.0

License

GPL (>= 2)

Maintainer

Alexander Ploner

Last Published

February 15th, 2017

Functions in Heatplus (2.12.0)

heatmapLayout

Generate a layout for an (annotated) heatmap
heatmap_plus

Display an Annotated Heatmap
print.annHeatmap

Printing information about annotated heatmaps
regHeatmap

Regular heatmaps with a legend
convAnnData

Converting data frames for display as annotation
doLegend

A simple legend
oldCutplot.dendrogram

Plot Subtrees of a Dendrogram in Different Colors
oldPicketplot

Barplots for Several Binary Variables
g2r.colors

Palette from green to red via black
heatmap_2

Display Data as Heatmap
Setting defaults

Override existing list entries
niceBreaks

Get nice (symmetric) breaks for an interval
picketPlot

Display a data frame of annotation information
plot.annHeatmap

Plotting method for annotated heatmaps
annHeatmap

Annotated heatmaps
breakColors

Color palette for (symmetric) breaks
RGBColVec

Alternative color schemes
Undocumented functions

Undocumented functions