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INet for Network Integration

The method is described in detail in the paper:

V. Policastro, M. Magnani, C. Angelini and A. Carissimo(2024). INet for network integration. Computational Statistics. https://link.springer.com/article/10.1007/s00180-024-01536-8

For the installation in R:

           devtools::install_github("ValeriaPolicastro/INet-Tool")

We want to identify general information by building a Consensus Network and then to obtain Case-Specific Networks one for each layer with the information present only in that layer and not in all the others.

Important Functions:

  • consensusNet to create the Consensus Network

  • specificNet to create the Case Specific Network

  • thresholdNet to change the threshold of the consensus from the similar layer after the algorithm

  • JWmean to see how distant are the layers at the beginning

Integration Network Algorithm:

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Version

Install

install.packages('INetTool')

Version

0.1.1

License

MIT + file LICENSE

Maintainer

Valeria Policastro

Last Published

June 19th, 2025

Functions in INetTool (0.1.1)

specificNet

specificNet
plotL

plotL
measuresNet

measuresNet
plotC

plotC
tryL_data

try Data
JWmatrix

JWmatrix
densityNet

densityNet
consensusNet

consensusNet
get_lower_tri_noDiag

get_lower_tri_noDiag
constructionGraph

constructionGraph
JWmean

JWmean
adj_rename

adj_rename
thresholdNet

thresholdNet
graphL_data

Graph Data
adjL_data

Adjacency Data
exampleL_data

Example Data
plotINet

plotINet