ITALICS (version 2.32.0)

analyseCGH: GLAD analysis

Description

Glad Analysis ot the genomic profile

Usage

analyseCGH(data, amplicon, deletion, deltaN, forceGL, param, nbsigma, ...)

Arguments

data

A data frame containing SNP's intensity, chromosome and position on the genome. data must have a Chr, X and LogRatio columns

amplicon

see the amplicon parameter in the daglad function

deletion

see the deletion parameter in the daglad function

deltaN

see the deltaN parameter in the daglad function

forceGL

see the forceGL parameter in the daglad function

param

see the param parameter in the daglad function

nbsigma

see the nbsigma parameter in the daglad function

...

Other daglad parameters.

Value

• An object of class profileCGH

source

Institut Curie, [e-mail].