getQuartet: Function to retrieve the information of each quartet
Description
This function retrieve information of each quartet.
This function use the pd.mapping50k.xba240, pd.mapping50k.hind240, pd.mapping250k.sty and pd.mapping250k.nsp package.
Usage
getQuartet(pkgname, snpInfo)
Arguments
pkgname
the chip type pd.mapping50k.xba240, pd.mapping50k.hind240, pd.mapping250k.sty or pd.mapping250k.nsp
snpInfo
a data frame containing SNPs position along the genome
Value
return a list with two fields.
fid : containing the position of each quartet on the CEL file.
quartetInfo : a data fame containing the columns : fsetid, fid, FL (fragment length) and GC (content of the quartet)