getColumns.Annotation

Annotation.getColumns

getColumns,Annotation-method

The <code><a rd-options="base" href="/link/data.frame?package=IdMappingRetrieval&version=1.20.0&to=base" data-mini-rdoc="base::data.frame">data.frame</a></code> from which ID pairs to be retrieved.

arrayType

if <code><a rd-options="base:logical" href="/link/TRUE?package=IdMappingRetrieval&version=1.20.0&to=base%3Alogical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code> enables diagnostic messages.

verbose


This is an internal method called from within getIdMap() on
Annotation object. The algorithm of the ID pairs extraction is annotation object type specific
and reflects the format and content of the data frame retrieved by a prticular Annotation object.


methods

internal

Data retrieval for identifier mapping performance analysis

Alex Lisovich

IdMappingRetrieval

ID Mapping Data Retrieval

getColumns.Annotation function

The <code><a href="data.frame" rd-options="base">data.frame</a></code> from which ID pairs to be retrieved.

if <code><a href="TRUE" rd-options="base:logical">TRUE</a></code> enables diagnostic messages.

This is an internal method called from within getIdMap() on
Annotation object. The algorithm of the ID pairs extraction is annotation object type specific
and reflects the format and content of the data frame retrieved by a prticular Annotation object.

getColumns.Annotation: Extract ID match pairs from the data frame obtained from the annotation data repository

Description

Usage

Arguments

Value

See Also