InPAS (version 1.4.4)

singleSampleAnalyze: do analysis for single sample

Description

do analysis for single sample by a hidden Markov model

Usage

singleSampleAnalyze(UTR3eset)

Arguments

UTR3eset

must be the output of getUTR3eSet

Value

a metrix of test results

Details

the test will be performed by a two states hidden Markov model.

See Also

UTR3eSet, getUTR3eSet, depmix

Examples

    path <- file.path(find.package("InPAS"), "extdata")
    load(file.path(path, "eset.MAQC.rda"))
    res <- singleSampleAnalyze(eset)