InterVA5 (version 1.1.3)

Replicate and Analyse 'InterVA5'

Description

Provides an R version of the 'InterVA5' software () for coding cause of death from verbal autopsies. It also provides simple graphical representation of individual and population level statistics.

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Version

Install

install.packages('InterVA5')

Monthly Downloads

287

Version

1.1.3

License

GPL-3

Maintainer

Jason Thomas

Last Published

July 21st, 2021

Functions in InterVA5 (1.1.3)

InterVA5

Provide InterVA5 analysis on the data input.

CSMF.interVA5

Summarize population level cause-specific mortality fraction as InterVA5 suggested.

COMCAT.interVA5

Summarize population level mortality fraction by Circumstance of Mortality Category

InterVA5-package

Perform InterVA5 algorithm and provide graphical summarization of COD distribution.

getTopSymptoms

Get the symptoms with the largest conditional probability (symptom | cause) for causes assigned by InterVA-5.

CSMF5

Summarize and plot a population level distribution of va probabilities.

causetextV5

Translation list of COD codes

probbaseV5

Conditional probability of InterVA5 (version 17 -- Sept. 9th, 2018)

DataCheck5

Data cleaning for InterVA-5 algorithm

print.interVA5_summary

Print method for summary of the results obtained from InterVA5 algorithm

InterVA5.plot

Plot an individual-level distribution of va probabilities.

summary.interVA5

Summary of the results obtained from InterVA5 algorithm

RandomVA5

200 records of Sample Input

probbaseV5_18

Version 18 of the conditional probability of InterVA5

whyNotCOD

Get the symptoms with the largest conditional probability (symptom | cause) using VA data.

probbaseV5_19

Version 19 of the conditional probability of InterVA5

probbaseV5_17

Version 17 of the conditional probability of InterVA5

probbaseV5_14

Version 14 of the conditional probability of InterVA5