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KSEAapp (version 0.99.0)

Kinase-Substrate Enrichment Analysis

Description

Infers relative kinase activity from phosphoproteomics data using the method described by Casado et al. (2013) .

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Version

Install

install.packages('KSEAapp')

Monthly Downloads

215

Version

0.99.0

License

MIT + file LICENSE

Maintainer

Danica Wiredja

Last Published

May 2nd, 2017

Functions in KSEAapp (0.99.0)

KSEA.Complete

The Complete KSEA App Analysis
KSEA.Heatmap

The KSEA App Analysis (KSEA Heatmap Only)
KSEA.Scores

The KSEA App Analysis (KSEA Kinase Scores Only)
PX

PX dataset for KSEA calculations
KSEA.KS_table

The KSEA App Analysis (K-S Dataset Only)
KSEA.Scores.1

One of the 3 datasets for heatmap plotting
KSEA.Scores.2

One of the 3 datasets for heatmap plotting
KSEA.Scores.3

One of the 3 datasets for heatmap plotting
KSData

Kinase-Substrate (K-S) Relationship Dataset
KSEA.Barplot

The KSEA App Analysis (KSEA Bar Plot Only)