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LVSmiRNA (version 1.22.0)
LVS normalization for Agilent miRNA data
Description
Normalization of Agilent miRNA arrays.
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Version
1.22.0
1.20.0
1.18.0
1.16.0
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Version
1.22.0
License
GPL-2
Maintainer
Stefano Calza
Last Published
February 12th, 2015
Functions in LVSmiRNA (1.22.0)
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read.mir
Read in miRNA Data from Agilent Feature Extractiion Output Files
preproc-methods
Methods for Function preproc
RLM
Robust Fitting of Linear Models
lvs
Least Variant Set selection and Normalization Function(s)
rlmFit
Fitter Functions for Robust Linear Models
MIR-spike-in
Data example
probeNames-methods
Methods for Function probeNames
sampleNames-methods
Methods for Function sampleNames
exprs-methods
Methods for Function exprs
estVC
Robust Linear Model to Estimate Residual Variance and Array Effect
summarize
LVSmiRNA Summarization Function(s) for microRNA Microarray
boxplot-methods
Methods for Function boxplot
preproc<--methods
Methods for Function preproc
plot-method
Plot of Residual Variance and Array Effect
featureNames-methods
Methods for Function featureNames
exprs<--methods
~~ Methods for Function exprs<- in Package `Biobase' ~~