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LVSmiRNA (version 1.22.0)

LVS normalization for Agilent miRNA data

Description

Normalization of Agilent miRNA arrays.

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Version

Version

1.22.0

License

GPL-2

Maintainer

Stefano Calza

Last Published

February 15th, 2017

Functions in LVSmiRNA (1.22.0)

read.mir

Read in miRNA Data from Agilent Feature Extractiion Output Files
preproc-methods

Methods for Function preproc
RLM

Robust Fitting of Linear Models
lvs

Least Variant Set selection and Normalization Function(s)
rlmFit

Fitter Functions for Robust Linear Models
MIR-spike-in

Data example
probeNames-methods

Methods for Function probeNames
sampleNames-methods

Methods for Function sampleNames
exprs-methods

Methods for Function exprs
estVC

Robust Linear Model to Estimate Residual Variance and Array Effect
summarize

LVSmiRNA Summarization Function(s) for microRNA Microarray
boxplot-methods

Methods for Function boxplot
preproc<--methods

Methods for Function preproc
plot-method

Plot of Residual Variance and Array Effect
featureNames-methods

Methods for Function featureNames
exprs<--methods

~~ Methods for Function exprs<- in Package `Biobase' ~~