BoxPlot

A function to draw a box plot for the DNA methylation dataset.

Utilizing a combination of machine learning models (Random Forest, Naive Bayes, K-Nearest Neighbor, Support Vector Machines, Extreme Gradient Boosting, and Linear Discriminant Analysis) and a deep Artificial Neural Network model, 'MBMethPred' can predict medulloblastoma subgroups, including wingless (WNT), sonic hedgehog (SHH), Group 3, and Group 4 from DNA methylation beta values. See Sharif Rahmani E, Lawarde A, Lingasamy P, Moreno SV, Salumets A and Modhukur V (2023), MBMethPred: a computational framework for the accurate classification of childhood medulloblastoma subgroups using data integration and AI-based approaches. Front. Genet. 14:1233657. <doi: 10.3389/fgene.2023.1233657> for more details.

Edris Sharif Rahmani

MBMethPred

Medulloblastoma Subgroups Prediction

Ankita Sunil Lawarde

Vijayachitra Modhukur

BoxPlot function

<dl><dt>File</dt>
<dd>The output of ReadMethylFile function.</dd>
<dt>Projname</dt>
<dd>A name used to name the plot. The default is null.</dd></dl>

Arguments

Box plot — BoxPlot

<dl>

<dt>File</dt>
<dd>The output of ReadMethylFile function.</dd>


<dt>Projname</dt>
<dd>A name used to name the plot. The default is null.</dd>

</dl>

BoxPlot: Box plot

Description

Usage

Value

Arguments

Examples