MDplot (version 1.0.1)

Visualising Molecular Dynamics Analyses

Description

Provides automatization for plot generation succeeding common molecular dynamics analyses. This includes straightforward plots, such as RMSD (Root-Mean-Square-Deviation) and RMSF (Root-Mean-Square-Fluctuation) but also more sophisticated ones such as dihedral angle maps, hydrogen bonds, cluster bar plots and DSSP (Definition of Secondary Structure of Proteins) analysis. Currently able to load GROMOS, GROMACS and AMBER formats, respectively.

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Install

install.packages('MDplot')

Monthly Downloads

207

Version

1.0.1

License

GPL-3

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Last Published

July 4th, 2017

Functions in MDplot (1.0.1)