MINTplates (version 1.0.1)

annotate_tRF: Annotate a tRF sequence

Description

Obtain tRF ID, type, whether exclusive to tRNA space, and tRNA sources of the tRF with its sequence.

Usage

annotate_tRF(sequence)

Arguments

sequence

tRF sequence.

Value

tRF ID, type, whether exclusive to tRNA space, and tRNA sources of the tRF.

References

Loher P, Telonis AG, Rigoutsos I. Sci Rep (2017) <doi: 10.1038/srep41184>

Examples

# NOT RUN {
sequence='TCCCTGGTGGTCTAGTGGTTAGGATTCGGC'
annotate_tRF(sequence)
# }