MLInterfaces v1.50.0

by Vince Carey

Uniform interfaces to R machine learning procedures for data in Bioconductor containers

This package provides uniform interfaces to machine learning code for data in R and Bioconductor containers.

Name	Description
performance-analytics	Assessing classifier performance
planarPlot-methods	Methods for Function planarPlot in Package `MLInterfaces'
balKfold.xvspec	generate a partition function for cross-validation, where the partitions are approximately balanced with respect to the distribution of a response variable
classifierOutput-class	Class "classifierOutput"
fsHistory	extract history of feature selection for a cross-validated machine learner
hclustWidget	shiny-oriented GUI for cluster or classifier exploration
projectedLearner-class	Class "projectedLearner"
RAB	real adaboost (Friedman et al)
confuTab	Compute confusion tables for a confusion matrix.
raboostCont-class	Class "raboostCont" ~~~
fs.absT	support for feature selection in cross-validation
varImpStruct-class	Class "varImpStruct" -- collect data on variable importance from various machine learning methods
learnerSchema-class	Class "learnerSchema" -- convey information on a machine learning function to the MLearn wrapper
plspinHcube	shiny app for interactive 3D visualization of mlbench hypercube
MLIntInternals	MLInterfaces infrastructure
predict.classifierOutput	Predict method for classifierOutput objects
xvalLoop	Cross-validation in clustered computing environments
xvalSpec	container for information specifying a cross-validated machine learning exercise
No Results!

License	LGPL
LazyLoad	yes
Collate	AllClasses.R RAB.R pplot.R varImp.R xval.R MLearn.R MLIConverters.R MLIPredicters.R localBridge.R methods-classifierOutput.R methods-clusteringOutput.R methods-learnerSchema.R schemaInterfaces.R featSel.R partPlot.R clDesign.R plsdaI.R performance-analytics.R hcw.R mlw.R pv.R plspinHcube.R
biocViews	Classification, Clustering

suggests	ada , ALL , caret (>= 5.07) , class , e1071 , golubEsets , gpls , hgu95av2.db , hu6800.db , ipred , keggorthology , kernlab , lattice , mboost , nnet , pamr , party , randomForest , som
depends	annotate , Biobase , BiocGenerics (>= 0.13.11) , cluster , methods , R (>= 2.9)
imports	fpc , gbm , gdata , genefilter , ggvis , hwriter , MASS , mlbench , pls , RColorBrewer , rda , rgl , rpart , sfsmisc , shiny , threejs
enhances	parallel
Contributors	Vince Carey, Jess Mar, Robert Gentleman